While there are few commercial software, there are also plenty of free referencing software available. Some of the software that I'm aware of are:
Bibus is a bibliographic and reference management software that works well with OpenOffice and Word.
JabRef is an open source bibliography reference manager. The native file format used by JabRef is BibTeX, the standard LaTeX bibliography format. JabRef runs on the Java VM (version 1.5 or newer), and should work equally well on Windows, Linux and Mac OS X.
KBibTeX is a BibTeX editor for KDE to edit bibliographies used with LaTeX. Features include comfortable input masks, starting web queries (e. g. Google or PubMed) and exporting to PDF, PostScript, RTF and XML/HTML. As KBibTeX is using KDE's KParts technology, KBibTeX can be embedded into Kile or Konqueror.
Zotero [zoh-TAIR-oh] is a free, easy-to-use Firefox extension to help you collect, manage, and cite your research sources. It lives right where you do your work—in the web browser itself.
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